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Cluster: HRGMv2_1048_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1048_24 HRGMv2_1048_24_3 869 3151 + 2.A.66.4.4
pfam HRGMv2_1048_24 HRGMv2_1048_24_4 3158 5098 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1048_24 HRGMv2_1048_24_5 5464 7077 + 3.A.1.5.27
TC HRGMv2_1048_24 HRGMv2_1048_24_6 7233 8189 + 3.A.1.5.38
TC HRGMv2_1048_24 HRGMv2_1048_24_7 8193 10208 + 3.A.1.5.25
TC HRGMv2_1048_24 HRGMv2_1048_24_8 10209 11036 + 3.A.1.5.27
CAZyme HRGMv2_1048_24 HRGMv2_1048_24_9 11210 12094 + CE7
Gene ID: HRGMv2_1048_24_3
Type: TC
Location: 869 - 3151 (+)
Gene ID: HRGMv2_1048_24_4
Type: pfam
Location: 3158 - 5098 (+)
Gene ID: HRGMv2_1048_24_5
Type: TC
Location: 5464 - 7077 (+)
Gene ID: HRGMv2_1048_24_6
Type: TC
Location: 7233 - 8189 (+)
Gene ID: HRGMv2_1048_24_7
Type: TC
Location: 8193 - 10208 (+)
Gene ID: HRGMv2_1048_24_8
Type: TC
Location: 10209 - 11036 (+)
Gene ID: HRGMv2_1048_24_9
Type: CAZyme
Location: 11210 - 12094 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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