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Cluster: HRGMv2_1048_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1048_11 HRGMv2_1048_11_11 15107 17557 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1048_11 HRGMv2_1048_11_12 17579 17698 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1048_11 HRGMv2_1048_11_13 17782 18501 + GntR
TC HRGMv2_1048_11 HRGMv2_1048_11_14 18808 20124 + 3.A.1.1.45
TC HRGMv2_1048_11 HRGMv2_1048_11_15 20212 21066 + 3.A.1.1.45
TC HRGMv2_1048_11 HRGMv2_1048_11_16 21066 21905 + 3.A.1.1.45
TC HRGMv2_1048_11 HRGMv2_1048_11_17 21974 23173 + 3.A.1.1.22
CAZyme HRGMv2_1048_11 HRGMv2_1048_11_18 23630 25897 - GT35
CAZyme HRGMv2_1048_11 HRGMv2_1048_11_19 26026 27531 - GH77
Gene ID: HRGMv2_1048_11_11
Type: TC
Location: 15107 - 17557 (-)
Gene ID: HRGMv2_1048_11_12
Type:
Location: 17579 - 17698 (+)
Gene ID: HRGMv2_1048_11_13
Type: TF
Location: 17782 - 18501 (+)
Gene ID: HRGMv2_1048_11_14
Type: TC
Location: 18808 - 20124 (+)
Gene ID: HRGMv2_1048_11_15
Type: TC
Location: 20212 - 21066 (+)
Gene ID: HRGMv2_1048_11_16
Type: TC
Location: 21066 - 21905 (+)
Gene ID: HRGMv2_1048_11_17
Type: TC
Location: 21974 - 23173 (+)
Gene ID: HRGMv2_1048_11_18
Type: CAZyme
Location: 23630 - 25897 (-)
Gene ID: HRGMv2_1048_11_19
Type: CAZyme
Location: 26026 - 27531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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