dbCAN HGM

Cluster: HRGMv2_1047_CGC4

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1047_3	HRGMv2_1047_3_55	57120	60515	-	CBM13 \| CBM13 \| CBM13
pfam	HRGMv2_1047_3	HRGMv2_1047_3_56	60802	61272	-	Y1_Tnp
CAZyme	HRGMv2_1047_3	HRGMv2_1047_3_57	61779	62741	+	GT81
CAZyme	HRGMv2_1047_3	HRGMv2_1047_3_58	62858	64093	-	GT4
CAZyme	HRGMv2_1047_3	HRGMv2_1047_3_59	64115	65173	-	GT2
CAZyme	HRGMv2_1047_3	HRGMv2_1047_3_60	65182	66297	-	GT2
TC	HRGMv2_1047_3	HRGMv2_1047_3_61	66299	67054	-	3.A.1.103.1
TC	HRGMv2_1047_3	HRGMv2_1047_3_62	67064	67876	-	3.A.1.103.4

Gene ID: HRGMv2_1047_3_55
Type: CAZyme
Location: 57120 - 60515 (-)

Gene ID: HRGMv2_1047_3_56
Type: pfam
Location: 60802 - 61272 (-)

Gene ID: HRGMv2_1047_3_57
Type: CAZyme
Location: 61779 - 62741 (+)

Gene ID: HRGMv2_1047_3_58
Type: CAZyme
Location: 62858 - 64093 (-)

Gene ID: HRGMv2_1047_3_59
Type: CAZyme
Location: 64115 - 65173 (-)

Gene ID: HRGMv2_1047_3_60
Type: CAZyme
Location: 65182 - 66297 (-)

Gene ID: HRGMv2_1047_3_61
Type: TC
Location: 66299 - 67054 (-)

Gene ID: HRGMv2_1047_3_62
Type: TC
Location: 67064 - 67876 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1047_3_58	vegetarian > vegan	3.45658	0.03038
HRGMv2_1047_3_59	vegetarian > vegan	3.72473	0.00701
HRGMv2_1047_3_61	vegetarian > vegan	1.60654	0.03038
HRGMv2_1047_3_62	vegetarian > vegan	2.87954	0.04237

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1047_3_56	nonIBD > UC	1.10398	0.04014