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Cluster: HRGMv2_1047_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1047_54 HRGMv2_1047_54_3 2248 3714 - 2.A.66.2.23
pfam HRGMv2_1047_54 HRGMv2_1047_54_4 3799 4746 - ATPgrasp_TupA
pfam HRGMv2_1047_54 HRGMv2_1047_54_5 4890 5978 - EpsG
CAZyme HRGMv2_1047_54 HRGMv2_1047_54_6 5975 7078 - GT4
pfam HRGMv2_1047_54 HRGMv2_1047_54_7 7075 8022 - C5-epim_C
CAZyme HRGMv2_1047_54 HRGMv2_1047_54_8 8022 9314 - GT4
pfam HRGMv2_1047_54 HRGMv2_1047_54_9 9320 10591 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1047_54 HRGMv2_1047_54_10 10635 11552 - GT2
TC HRGMv2_1047_54 HRGMv2_1047_54_11 11556 12320 - 9.B.18.1.2
Gene ID: HRGMv2_1047_54_3
Type: TC
Location: 2248 - 3714 (-)
Gene ID: HRGMv2_1047_54_4
Type: pfam
Location: 3799 - 4746 (-)
Gene ID: HRGMv2_1047_54_5
Type: pfam
Location: 4890 - 5978 (-)
Gene ID: HRGMv2_1047_54_6
Type: CAZyme
Location: 5975 - 7078 (-)
Gene ID: HRGMv2_1047_54_7
Type: pfam
Location: 7075 - 8022 (-)
Gene ID: HRGMv2_1047_54_8
Type: CAZyme
Location: 8022 - 9314 (-)
Gene ID: HRGMv2_1047_54_9
Type: pfam
Location: 9320 - 10591 (-)
Gene ID: HRGMv2_1047_54_10
Type: CAZyme
Location: 10635 - 11552 (-)
Gene ID: HRGMv2_1047_54_11
Type: TC
Location: 11556 - 12320 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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