dbCAN Logo

Cluster: HRGMv2_1047_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1047_30 HRGMv2_1047_30_11 14944 17394 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1047_30 HRGMv2_1047_30_12 17416 17535 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1047_30 HRGMv2_1047_30_13 17619 18338 + GntR
TC HRGMv2_1047_30 HRGMv2_1047_30_14 18645 19961 + 3.A.1.1.45
TC HRGMv2_1047_30 HRGMv2_1047_30_15 20049 20903 + 3.A.1.1.45
TC HRGMv2_1047_30 HRGMv2_1047_30_16 20903 21742 + 3.A.1.1.45
TC HRGMv2_1047_30 HRGMv2_1047_30_17 21811 23010 + 3.A.1.1.22
CAZyme HRGMv2_1047_30 HRGMv2_1047_30_18 23466 24512 - GT35
Gene ID: HRGMv2_1047_30_11
Type: TC
Location: 14944 - 17394 (-)
Gene ID: HRGMv2_1047_30_12
Type:
Location: 17416 - 17535 (+)
Gene ID: HRGMv2_1047_30_13
Type: TF
Location: 17619 - 18338 (+)
Gene ID: HRGMv2_1047_30_14
Type: TC
Location: 18645 - 19961 (+)
Gene ID: HRGMv2_1047_30_15
Type: TC
Location: 20049 - 20903 (+)
Gene ID: HRGMv2_1047_30_16
Type: TC
Location: 20903 - 21742 (+)
Gene ID: HRGMv2_1047_30_17
Type: TC
Location: 21811 - 23010 (+)
Gene ID: HRGMv2_1047_30_18
Type: CAZyme
Location: 23466 - 24512 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List