dbCAN Logo

Cluster: HRGMv2_1047_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1047_25 HRGMv2_1047_25_1 1 1161 + 2.A.66.4.4
pfam HRGMv2_1047_25 HRGMv2_1047_25_2 1168 3108 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1047_25 HRGMv2_1047_25_3 3474 5087 + 3.A.1.5.27
TC HRGMv2_1047_25 HRGMv2_1047_25_4 5245 6201 + 3.A.1.5.38
TC HRGMv2_1047_25 HRGMv2_1047_25_5 6205 8220 + 3.A.1.5.25
TC HRGMv2_1047_25 HRGMv2_1047_25_6 8221 9048 + 3.A.1.5.27
CAZyme HRGMv2_1047_25 HRGMv2_1047_25_7 9180 10106 + CE7
Gene ID: HRGMv2_1047_25_1
Type: TC
Location: 1 - 1161 (+)
Gene ID: HRGMv2_1047_25_2
Type: pfam
Location: 1168 - 3108 (+)
Gene ID: HRGMv2_1047_25_3
Type: TC
Location: 3474 - 5087 (+)
Gene ID: HRGMv2_1047_25_4
Type: TC
Location: 5245 - 6201 (+)
Gene ID: HRGMv2_1047_25_5
Type: TC
Location: 6205 - 8220 (+)
Gene ID: HRGMv2_1047_25_6
Type: TC
Location: 8221 - 9048 (+)
Gene ID: HRGMv2_1047_25_7
Type: CAZyme
Location: 9180 - 10106 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List