dbCAN Logo

Cluster: HRGMv2_1046_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1046_23 HRGMv2_1046_23_2 410 1792 - GH4
TC HRGMv2_1046_23 HRGMv2_1046_23_3 1796 3412 - 4.A.1.1.3
pfam HRGMv2_1046_23 HRGMv2_1046_23_4 3512 4378 - PRD | PRD | CAT_RBD
TC HRGMv2_1046_23 HRGMv2_1046_23_5 4385 4897 - 4.A.1.2.5
STP HRGMv2_1046_23 HRGMv2_1046_23_6 5174 5935 - Fer4 | Fer4
TC HRGMv2_1046_23 HRGMv2_1046_23_7 6592 8829 - 1.I.1.1.3
STP HRGMv2_1046_23 HRGMv2_1046_23_8 9410 10372 + FHA
STP HRGMv2_1046_23 HRGMv2_1046_23_9 10544 12628 + Pkinase
TC HRGMv2_1046_23 HRGMv2_1046_23_10 13119 15461 + 3.A.3.5.15
Gene ID: HRGMv2_1046_23_2
Type: CAZyme
Location: 410 - 1792 (-)
Gene ID: HRGMv2_1046_23_3
Type: TC
Location: 1796 - 3412 (-)
Gene ID: HRGMv2_1046_23_4
Type: pfam
Location: 3512 - 4378 (-)
Gene ID: HRGMv2_1046_23_5
Type: TC
Location: 4385 - 4897 (-)
Gene ID: HRGMv2_1046_23_6
Type: STP
Location: 5174 - 5935 (-)
Gene ID: HRGMv2_1046_23_7
Type: TC
Location: 6592 - 8829 (-)
Gene ID: HRGMv2_1046_23_8
Type: STP
Location: 9410 - 10372 (+)
Gene ID: HRGMv2_1046_23_9
Type: STP
Location: 10544 - 12628 (+)
Gene ID: HRGMv2_1046_23_10
Type: TC
Location: 13119 - 15461 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List