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Cluster: HRGMv2_1045_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1045_43 HRGMv2_1045_43_1 3 818 + 9.B.144.1.5
pfam HRGMv2_1045_43 HRGMv2_1045_43_2 868 1062 + Transposase_mut
NULL(UNKNOWN) HRGMv2_1045_43 HRGMv2_1045_43_3 1090 1248 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1045_43 HRGMv2_1045_43_4 1365 2600 - GT4
CAZyme HRGMv2_1045_43 HRGMv2_1045_43_5 2622 3680 - GT2
CAZyme HRGMv2_1045_43 HRGMv2_1045_43_6 3689 4804 - GT2
TC HRGMv2_1045_43 HRGMv2_1045_43_7 4806 5561 - 3.A.1.103.1
TC HRGMv2_1045_43 HRGMv2_1045_43_8 5571 6383 - 3.A.1.103.4
CAZyme HRGMv2_1045_43 HRGMv2_1045_43_9 6541 7677 - GT2
CAZyme HRGMv2_1045_43 HRGMv2_1045_43_10 7873 9858 + GT2
Gene ID: HRGMv2_1045_43_1
Type: TC
Location: 3 - 818 (+)
Gene ID: HRGMv2_1045_43_2
Type: pfam
Location: 868 - 1062 (+)
Gene ID: HRGMv2_1045_43_3
Type:
Location: 1090 - 1248 (+)
Gene ID: HRGMv2_1045_43_4
Type: CAZyme
Location: 1365 - 2600 (-)
Gene ID: HRGMv2_1045_43_5
Type: CAZyme
Location: 2622 - 3680 (-)
Gene ID: HRGMv2_1045_43_6
Type: CAZyme
Location: 3689 - 4804 (-)
Gene ID: HRGMv2_1045_43_7
Type: TC
Location: 4806 - 5561 (-)
Gene ID: HRGMv2_1045_43_8
Type: TC
Location: 5571 - 6383 (-)
Gene ID: HRGMv2_1045_43_9
Type: CAZyme
Location: 6541 - 7677 (-)
Gene ID: HRGMv2_1045_43_10
Type: CAZyme
Location: 7873 - 9858 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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