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Cluster: HRGMv2_1045_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1045_31 HRGMv2_1045_31_14 17101 19554 - 4.A.1.1.8
TF HRGMv2_1045_31 HRGMv2_1045_31_15 19779 20498 + GntR
TC HRGMv2_1045_31 HRGMv2_1045_31_16 20805 22121 + 3.A.1.1.45
TC HRGMv2_1045_31 HRGMv2_1045_31_17 22209 23063 + 3.A.1.1.45
TC HRGMv2_1045_31 HRGMv2_1045_31_18 23063 23902 + 3.A.1.1.45
TC HRGMv2_1045_31 HRGMv2_1045_31_19 23971 25170 + 3.A.1.1.22
CAZyme HRGMv2_1045_31 HRGMv2_1045_31_20 25703 27970 - GT35
CAZyme HRGMv2_1045_31 HRGMv2_1045_31_21 28099 29604 - GH77
Gene ID: HRGMv2_1045_31_14
Type: TC
Location: 17101 - 19554 (-)
Gene ID: HRGMv2_1045_31_15
Type: TF
Location: 19779 - 20498 (+)
Gene ID: HRGMv2_1045_31_16
Type: TC
Location: 20805 - 22121 (+)
Gene ID: HRGMv2_1045_31_17
Type: TC
Location: 22209 - 23063 (+)
Gene ID: HRGMv2_1045_31_18
Type: TC
Location: 23063 - 23902 (+)
Gene ID: HRGMv2_1045_31_19
Type: TC
Location: 23971 - 25170 (+)
Gene ID: HRGMv2_1045_31_20
Type: CAZyme
Location: 25703 - 27970 (-)
Gene ID: HRGMv2_1045_31_21
Type: CAZyme
Location: 28099 - 29604 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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