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Cluster: HRGMv2_1045_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1045_29 HRGMv2_1045_29_6 6740 7570 - 3.A.1.132.3
pfam HRGMv2_1045_29 HRGMv2_1045_29_7 7827 10706 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_1045_29 HRGMv2_1045_29_8 10841 11341 + tRNA_edit
TC HRGMv2_1045_29 HRGMv2_1045_29_9 11345 13648 + 2.A.66.4.4
pfam HRGMv2_1045_29 HRGMv2_1045_29_10 13655 15595 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1045_29 HRGMv2_1045_29_11 15961 17574 + 3.A.1.5.27
TC HRGMv2_1045_29 HRGMv2_1045_29_12 17730 18686 + 3.A.1.5.38
TC HRGMv2_1045_29 HRGMv2_1045_29_13 18690 20705 + 3.A.1.5.25
TC HRGMv2_1045_29 HRGMv2_1045_29_14 20706 21533 + 3.A.1.5.27
CAZyme HRGMv2_1045_29 HRGMv2_1045_29_15 21707 22591 + CE7
Gene ID: HRGMv2_1045_29_6
Type: TC
Location: 6740 - 7570 (-)
Gene ID: HRGMv2_1045_29_7
Type: pfam
Location: 7827 - 10706 (+)
Gene ID: HRGMv2_1045_29_8
Type: pfam
Location: 10841 - 11341 (+)
Gene ID: HRGMv2_1045_29_9
Type: TC
Location: 11345 - 13648 (+)
Gene ID: HRGMv2_1045_29_10
Type: pfam
Location: 13655 - 15595 (+)
Gene ID: HRGMv2_1045_29_11
Type: TC
Location: 15961 - 17574 (+)
Gene ID: HRGMv2_1045_29_12
Type: TC
Location: 17730 - 18686 (+)
Gene ID: HRGMv2_1045_29_13
Type: TC
Location: 18690 - 20705 (+)
Gene ID: HRGMv2_1045_29_14
Type: TC
Location: 20706 - 21533 (+)
Gene ID: HRGMv2_1045_29_15
Type: CAZyme
Location: 21707 - 22591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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