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Cluster: HRGMv2_1043_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1043_6 HRGMv2_1043_6_55 59992 61368 - GH13_20
TC HRGMv2_1043_6 HRGMv2_1043_6_56 61551 62747 - 2.A.1.2.18
TC HRGMv2_1043_6 HRGMv2_1043_6_57 62868 65228 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_1043_6 HRGMv2_1043_6_58 65350 65670 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_1043_6 HRGMv2_1043_6_59 65718 66617 - S09.UPW
TC HRGMv2_1043_6 HRGMv2_1043_6_60 66862 67425 + 4.A.1.2.6
pfam HRGMv2_1043_6 HRGMv2_1043_6_61 67607 69010 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_1043_6 HRGMv2_1043_6_62 69260 70045 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1043_6 HRGMv2_1043_6_63 70206 71186 + 3.A.1.34.1
TC HRGMv2_1043_6 HRGMv2_1043_6_64 71391 72314 + 3.A.1.34.1
TC HRGMv2_1043_6 HRGMv2_1043_6_65 72307 73101 + 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1043_6 HRGMv2_1043_6_66 73259 73423 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1043_6 HRGMv2_1043_6_67 73437 74204 + 1.A.23.4.2
pfam HRGMv2_1043_6 HRGMv2_1043_6_68 74292 76208 + Bmp
pfam HRGMv2_1043_6 HRGMv2_1043_6_69 76205 76915 + Metallophos | Metallophos_2
TC HRGMv2_1043_6 HRGMv2_1043_6_70 77203 77910 - 1.C.82.1.1
Gene ID: HRGMv2_1043_6_55
Type: CAZyme
Location: 59992 - 61368 (-)
Gene ID: HRGMv2_1043_6_56
Type: TC
Location: 61551 - 62747 (-)
Gene ID: HRGMv2_1043_6_57
Type: TC
Location: 62868 - 65228 (-)
Gene ID: HRGMv2_1043_6_58
Type:
Location: 65350 - 65670 (-)
Gene ID: HRGMv2_1043_6_59
Type: peptidase
Location: 65718 - 66617 (-)
Gene ID: HRGMv2_1043_6_60
Type: TC
Location: 66862 - 67425 (+)
Gene ID: HRGMv2_1043_6_61
Type: pfam
Location: 67607 - 69010 (+)
Gene ID: HRGMv2_1043_6_62
Type:
Location: 69260 - 70045 (+)
Gene ID: HRGMv2_1043_6_63
Type: TC
Location: 70206 - 71186 (+)
Gene ID: HRGMv2_1043_6_64
Type: TC
Location: 71391 - 72314 (+)
Gene ID: HRGMv2_1043_6_65
Type: TC
Location: 72307 - 73101 (+)
Gene ID: HRGMv2_1043_6_66
Type:
Location: 73259 - 73423 (+)
Gene ID: HRGMv2_1043_6_67
Type: TC
Location: 73437 - 74204 (+)
Gene ID: HRGMv2_1043_6_68
Type: pfam
Location: 74292 - 76208 (+)
Gene ID: HRGMv2_1043_6_69
Type: pfam
Location: 76205 - 76915 (+)
Gene ID: HRGMv2_1043_6_70
Type: TC
Location: 77203 - 77910 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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