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Cluster: HRGMv2_1043_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1043_4 HRGMv2_1043_4_100 102221 103726 + GH77
CAZyme HRGMv2_1043_4 HRGMv2_1043_4_101 103856 106123 + GT35
TC HRGMv2_1043_4 HRGMv2_1043_4_102 106594 107793 - 3.A.1.1.22
TC HRGMv2_1043_4 HRGMv2_1043_4_103 107862 108701 - 3.A.1.1.45
TC HRGMv2_1043_4 HRGMv2_1043_4_104 108701 109555 - 3.A.1.1.45
TC HRGMv2_1043_4 HRGMv2_1043_4_105 109643 110959 - 3.A.1.1.45
TF HRGMv2_1043_4 HRGMv2_1043_4_106 111266 111985 - GntR
NULL(UNKNOWN) HRGMv2_1043_4 HRGMv2_1043_4_107 112069 112188 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1043_4 HRGMv2_1043_4_108 112210 114663 + 4.A.1.1.8
Gene ID: HRGMv2_1043_4_100
Type: CAZyme
Location: 102221 - 103726 (+)
Gene ID: HRGMv2_1043_4_101
Type: CAZyme
Location: 103856 - 106123 (+)
Gene ID: HRGMv2_1043_4_102
Type: TC
Location: 106594 - 107793 (-)
Gene ID: HRGMv2_1043_4_103
Type: TC
Location: 107862 - 108701 (-)
Gene ID: HRGMv2_1043_4_104
Type: TC
Location: 108701 - 109555 (-)
Gene ID: HRGMv2_1043_4_105
Type: TC
Location: 109643 - 110959 (-)
Gene ID: HRGMv2_1043_4_106
Type: TF
Location: 111266 - 111985 (-)
Gene ID: HRGMv2_1043_4_107
Type:
Location: 112069 - 112188 (-)
Gene ID: HRGMv2_1043_4_108
Type: TC
Location: 112210 - 114663 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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