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Cluster: HRGMv2_1043_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1043_4 HRGMv2_1043_4_23 22053 23411 - 2.A.33.1.1
pfam HRGMv2_1043_4 HRGMv2_1043_4_24 23679 24602 - DHH | DHHA2
STP HRGMv2_1043_4 HRGMv2_1043_4_25 24768 25721 - Glucokinase
TC HRGMv2_1043_4 HRGMv2_1043_4_26 25962 26294 - 4.A.3.2.3
TC HRGMv2_1043_4 HRGMv2_1043_4_27 26304 26606 - 4.A.3.2.9
TC HRGMv2_1043_4 HRGMv2_1043_4_28 26757 27551 - 4.A.3.2.9
STP HRGMv2_1043_4 HRGMv2_1043_4_29 27588 28109 - PTS_EIIC
CAZyme HRGMv2_1043_4 HRGMv2_1043_4_30 28226 29626 - GH1
Gene ID: HRGMv2_1043_4_23
Type: TC
Location: 22053 - 23411 (-)
Gene ID: HRGMv2_1043_4_24
Type: pfam
Location: 23679 - 24602 (-)
Gene ID: HRGMv2_1043_4_25
Type: STP
Location: 24768 - 25721 (-)
Gene ID: HRGMv2_1043_4_26
Type: TC
Location: 25962 - 26294 (-)
Gene ID: HRGMv2_1043_4_27
Type: TC
Location: 26304 - 26606 (-)
Gene ID: HRGMv2_1043_4_28
Type: TC
Location: 26757 - 27551 (-)
Gene ID: HRGMv2_1043_4_29
Type: STP
Location: 27588 - 28109 (-)
Gene ID: HRGMv2_1043_4_30
Type: CAZyme
Location: 28226 - 29626 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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