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Cluster: HRGMv2_1043_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1043_2 HRGMv2_1043_2_29 36348 38024 + 3.A.1.5.35
TC HRGMv2_1043_2 HRGMv2_1043_2_30 38181 39218 + 3.A.1.5.37
TC HRGMv2_1043_2 HRGMv2_1043_2_31 39233 40168 + 3.A.1.5.11
TC HRGMv2_1043_2 HRGMv2_1043_2_32 40171 41262 + 3.A.1.5.34
TC HRGMv2_1043_2 HRGMv2_1043_2_33 41262 42290 + 3.A.1.5.36
STP HRGMv2_1043_2 HRGMv2_1043_2_34 43036 45381 + GAF | SpoIIE
STP HRGMv2_1043_2 HRGMv2_1043_2_35 45463 46209 + STAS
CAZyme HRGMv2_1043_2 HRGMv2_1043_2_36 46798 48531 + GH13_30
Gene ID: HRGMv2_1043_2_29
Type: TC
Location: 36348 - 38024 (+)
Gene ID: HRGMv2_1043_2_30
Type: TC
Location: 38181 - 39218 (+)
Gene ID: HRGMv2_1043_2_31
Type: TC
Location: 39233 - 40168 (+)
Gene ID: HRGMv2_1043_2_32
Type: TC
Location: 40171 - 41262 (+)
Gene ID: HRGMv2_1043_2_33
Type: TC
Location: 41262 - 42290 (+)
Gene ID: HRGMv2_1043_2_34
Type: STP
Location: 43036 - 45381 (+)
Gene ID: HRGMv2_1043_2_35
Type: STP
Location: 45463 - 46209 (+)
Gene ID: HRGMv2_1043_2_36
Type: CAZyme
Location: 46798 - 48531 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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