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Cluster: HRGMv2_1043_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1043_13 HRGMv2_1043_13_48 57846 59015 - CE9
STP HRGMv2_1043_13 HRGMv2_1043_13_49 59134 60300 - SIS | SIS
TF HRGMv2_1043_13 HRGMv2_1043_13_50 60415 61146 - GntR
TC HRGMv2_1043_13 HRGMv2_1043_13_51 61331 62413 - 4.A.6.1.4
TC HRGMv2_1043_13 HRGMv2_1043_13_52 62403 63203 - 4.A.6.1.4
TC HRGMv2_1043_13 HRGMv2_1043_13_53 63293 63775 - 4.A.6.1.4
pfam HRGMv2_1043_13 HRGMv2_1043_13_54 63812 64093 - YajC
TC HRGMv2_1043_13 HRGMv2_1043_13_55 64093 64536 - 4.A.6.1.16
Gene ID: HRGMv2_1043_13_48
Type: CAZyme
Location: 57846 - 59015 (-)
Gene ID: HRGMv2_1043_13_49
Type: STP
Location: 59134 - 60300 (-)
Gene ID: HRGMv2_1043_13_50
Type: TF
Location: 60415 - 61146 (-)
Gene ID: HRGMv2_1043_13_51
Type: TC
Location: 61331 - 62413 (-)
Gene ID: HRGMv2_1043_13_52
Type: TC
Location: 62403 - 63203 (-)
Gene ID: HRGMv2_1043_13_53
Type: TC
Location: 63293 - 63775 (-)
Gene ID: HRGMv2_1043_13_54
Type: pfam
Location: 63812 - 64093 (-)
Gene ID: HRGMv2_1043_13_55
Type: TC
Location: 64093 - 64536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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