dbCAN Logo

Cluster: HRGMv2_1043_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1043_13 HRGMv2_1043_13_28 33871 34209 - 4.A.3.1.2
TF HRGMv2_1043_13 HRGMv2_1043_13_29 34424 35428 - LacI
TC HRGMv2_1043_13 HRGMv2_1043_13_30 35785 37560 + 4.A.3.1.1
CAZyme HRGMv2_1043_13 HRGMv2_1043_13_31 37627 39066 + GH1
TF HRGMv2_1043_13 HRGMv2_1043_13_32 39333 40370 - LacI
CAZyme HRGMv2_1043_13 HRGMv2_1043_13_33 40712 42154 + GH1
TC HRGMv2_1043_13 HRGMv2_1043_13_34 42331 44091 + 4.A.3.1.1
TF HRGMv2_1043_13 HRGMv2_1043_13_35 44425 45435 - LacI
TC HRGMv2_1043_13 HRGMv2_1043_13_36 45711 47489 + 4.A.3.1.1
CAZyme HRGMv2_1043_13 HRGMv2_1043_13_37 47565 48986 + GH1
Gene ID: HRGMv2_1043_13_28
Type: TC
Location: 33871 - 34209 (-)
Gene ID: HRGMv2_1043_13_29
Type: TF
Location: 34424 - 35428 (-)
Gene ID: HRGMv2_1043_13_30
Type: TC
Location: 35785 - 37560 (+)
Gene ID: HRGMv2_1043_13_31
Type: CAZyme
Location: 37627 - 39066 (+)
Gene ID: HRGMv2_1043_13_32
Type: TF
Location: 39333 - 40370 (-)
Gene ID: HRGMv2_1043_13_33
Type: CAZyme
Location: 40712 - 42154 (+)
Gene ID: HRGMv2_1043_13_34
Type: TC
Location: 42331 - 44091 (+)
Gene ID: HRGMv2_1043_13_35
Type: TF
Location: 44425 - 45435 (-)
Gene ID: HRGMv2_1043_13_36
Type: TC
Location: 45711 - 47489 (+)
Gene ID: HRGMv2_1043_13_37
Type: CAZyme
Location: 47565 - 48986 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List