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Cluster: HRGMv2_1043_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1043_2 HRGMv2_1043_2_11 14382 16064 + 2.A.66.4.4
pfam HRGMv2_1043_2 HRGMv2_1043_2_12 16071 18011 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1043_2 HRGMv2_1043_2_13 18377 19990 + 3.A.1.5.27
TC HRGMv2_1043_2 HRGMv2_1043_2_14 20148 21104 + 3.A.1.5.38
TC HRGMv2_1043_2 HRGMv2_1043_2_15 21108 23123 + 3.A.1.5.25
TC HRGMv2_1043_2 HRGMv2_1043_2_16 23124 23951 + 3.A.1.5.27
CAZyme HRGMv2_1043_2 HRGMv2_1043_2_17 24083 25009 + CE7
Gene ID: HRGMv2_1043_2_11
Type: TC
Location: 14382 - 16064 (+)
Gene ID: HRGMv2_1043_2_12
Type: pfam
Location: 16071 - 18011 (+)
Gene ID: HRGMv2_1043_2_13
Type: TC
Location: 18377 - 19990 (+)
Gene ID: HRGMv2_1043_2_14
Type: TC
Location: 20148 - 21104 (+)
Gene ID: HRGMv2_1043_2_15
Type: TC
Location: 21108 - 23123 (+)
Gene ID: HRGMv2_1043_2_16
Type: TC
Location: 23124 - 23951 (+)
Gene ID: HRGMv2_1043_2_17
Type: CAZyme
Location: 24083 - 25009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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