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Cluster: HRGMv2_1042_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1042_4 HRGMv2_1042_4_85 87201 88622 - GH1
TC HRGMv2_1042_4 HRGMv2_1042_4_86 88698 90476 - 4.A.3.1.1
TF HRGMv2_1042_4 HRGMv2_1042_4_87 90761 91762 + LacI
CAZyme HRGMv2_1042_4 HRGMv2_1042_4_88 92097 93536 - GH1
TC HRGMv2_1042_4 HRGMv2_1042_4_89 93607 95382 - 4.A.3.1.1
TF HRGMv2_1042_4 HRGMv2_1042_4_90 95740 96744 + LacI
TC HRGMv2_1042_4 HRGMv2_1042_4_91 96966 97304 + 4.A.3.1.2
Gene ID: HRGMv2_1042_4_85
Type: CAZyme
Location: 87201 - 88622 (-)
Gene ID: HRGMv2_1042_4_86
Type: TC
Location: 88698 - 90476 (-)
Gene ID: HRGMv2_1042_4_87
Type: TF
Location: 90761 - 91762 (+)
Gene ID: HRGMv2_1042_4_88
Type: CAZyme
Location: 92097 - 93536 (-)
Gene ID: HRGMv2_1042_4_89
Type: TC
Location: 93607 - 95382 (-)
Gene ID: HRGMv2_1042_4_90
Type: TF
Location: 95740 - 96744 (+)
Gene ID: HRGMv2_1042_4_91
Type: TC
Location: 96966 - 97304 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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