dbCAN Logo

Cluster: HRGMv2_1042_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1042_8 HRGMv2_1042_8_28 35549 37225 + 3.A.1.5.35
TC HRGMv2_1042_8 HRGMv2_1042_8_29 37382 38419 + 3.A.1.5.37
TC HRGMv2_1042_8 HRGMv2_1042_8_30 38434 39369 + 3.A.1.5.11
TC HRGMv2_1042_8 HRGMv2_1042_8_31 39372 40463 + 3.A.1.5.34
TC HRGMv2_1042_8 HRGMv2_1042_8_32 40463 41491 + 3.A.1.5.36
STP HRGMv2_1042_8 HRGMv2_1042_8_33 42241 44586 + GAF | SpoIIE
STP HRGMv2_1042_8 HRGMv2_1042_8_34 44665 45411 + STAS
CAZyme HRGMv2_1042_8 HRGMv2_1042_8_35 45907 47730 + GH13_30
Gene ID: HRGMv2_1042_8_28
Type: TC
Location: 35549 - 37225 (+)
Gene ID: HRGMv2_1042_8_29
Type: TC
Location: 37382 - 38419 (+)
Gene ID: HRGMv2_1042_8_30
Type: TC
Location: 38434 - 39369 (+)
Gene ID: HRGMv2_1042_8_31
Type: TC
Location: 39372 - 40463 (+)
Gene ID: HRGMv2_1042_8_32
Type: TC
Location: 40463 - 41491 (+)
Gene ID: HRGMv2_1042_8_33
Type: STP
Location: 42241 - 44586 (+)
Gene ID: HRGMv2_1042_8_34
Type: STP
Location: 44665 - 45411 (+)
Gene ID: HRGMv2_1042_8_35
Type: CAZyme
Location: 45907 - 47730 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List