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Cluster: HRGMv2_1041_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1041_6 HRGMv2_1041_6_1 1 1470 + 2.A.66.4.4
pfam HRGMv2_1041_6 HRGMv2_1041_6_2 1477 3417 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1041_6 HRGMv2_1041_6_3 3783 5396 + 3.A.1.5.27
TC HRGMv2_1041_6 HRGMv2_1041_6_4 5552 6508 + 3.A.1.5.38
TC HRGMv2_1041_6 HRGMv2_1041_6_5 6512 8527 + 3.A.1.5.25
TC HRGMv2_1041_6 HRGMv2_1041_6_6 8528 9355 + 3.A.1.5.27
CAZyme HRGMv2_1041_6 HRGMv2_1041_6_7 9487 10413 + CE7
Gene ID: HRGMv2_1041_6_1
Type: TC
Location: 1 - 1470 (+)
Gene ID: HRGMv2_1041_6_2
Type: pfam
Location: 1477 - 3417 (+)
Gene ID: HRGMv2_1041_6_3
Type: TC
Location: 3783 - 5396 (+)
Gene ID: HRGMv2_1041_6_4
Type: TC
Location: 5552 - 6508 (+)
Gene ID: HRGMv2_1041_6_5
Type: TC
Location: 6512 - 8527 (+)
Gene ID: HRGMv2_1041_6_6
Type: TC
Location: 8528 - 9355 (+)
Gene ID: HRGMv2_1041_6_7
Type: CAZyme
Location: 9487 - 10413 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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