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Cluster: HRGMv2_1041_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1041_4 HRGMv2_1041_4_16 18111 19424 - GH140
TC HRGMv2_1041_4 HRGMv2_1041_4_17 19636 21063 - 4.A.1.2.11
peptidase HRGMv2_1041_4 HRGMv2_1041_4_18 21554 22891 + S09.UPW
pfam HRGMv2_1041_4 HRGMv2_1041_4_19 23158 24669 + Sde182_NH-like
CAZyme HRGMv2_1041_4 HRGMv2_1041_4_20 25009 26439 - GH1
pfam HRGMv2_1041_4 HRGMv2_1041_4_21 26984 27628 - DUF4867
peptidase HRGMv2_1041_4 HRGMv2_1041_4_22 27756 28736 - S09.UPC
TC HRGMv2_1041_4 HRGMv2_1041_4_23 28842 30212 - 4.A.1.2.6
Gene ID: HRGMv2_1041_4_16
Type: CAZyme
Location: 18111 - 19424 (-)
Gene ID: HRGMv2_1041_4_17
Type: TC
Location: 19636 - 21063 (-)
Gene ID: HRGMv2_1041_4_18
Type: peptidase
Location: 21554 - 22891 (+)
Gene ID: HRGMv2_1041_4_19
Type: pfam
Location: 23158 - 24669 (+)
Gene ID: HRGMv2_1041_4_20
Type: CAZyme
Location: 25009 - 26439 (-)
Gene ID: HRGMv2_1041_4_21
Type: pfam
Location: 26984 - 27628 (-)
Gene ID: HRGMv2_1041_4_22
Type: peptidase
Location: 27756 - 28736 (-)
Gene ID: HRGMv2_1041_4_23
Type: TC
Location: 28842 - 30212 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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