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Cluster: HRGMv2_1041_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1041_60 HRGMv2_1041_60_6 3371 3814 + 4.A.6.1.16
pfam HRGMv2_1041_60 HRGMv2_1041_60_7 3814 4095 + YajC
TC HRGMv2_1041_60 HRGMv2_1041_60_8 4132 4614 + 4.A.6.1.4
TC HRGMv2_1041_60 HRGMv2_1041_60_9 4705 5505 + 4.A.6.1.4
TC HRGMv2_1041_60 HRGMv2_1041_60_10 5495 6577 + 4.A.6.1.4
TF HRGMv2_1041_60 HRGMv2_1041_60_11 6762 7493 + GntR
STP HRGMv2_1041_60 HRGMv2_1041_60_12 7608 8774 + SIS | SIS
CAZyme HRGMv2_1041_60 HRGMv2_1041_60_13 8893 10062 + CE9
Gene ID: HRGMv2_1041_60_6
Type: TC
Location: 3371 - 3814 (+)
Gene ID: HRGMv2_1041_60_7
Type: pfam
Location: 3814 - 4095 (+)
Gene ID: HRGMv2_1041_60_8
Type: TC
Location: 4132 - 4614 (+)
Gene ID: HRGMv2_1041_60_9
Type: TC
Location: 4705 - 5505 (+)
Gene ID: HRGMv2_1041_60_10
Type: TC
Location: 5495 - 6577 (+)
Gene ID: HRGMv2_1041_60_11
Type: TF
Location: 6762 - 7493 (+)
Gene ID: HRGMv2_1041_60_12
Type: STP
Location: 7608 - 8774 (+)
Gene ID: HRGMv2_1041_60_13
Type: CAZyme
Location: 8893 - 10062 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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