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Cluster: HRGMv2_1040_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1040_22 HRGMv2_1040_22_7 8632 10314 + 2.A.66.4.4
pfam HRGMv2_1040_22 HRGMv2_1040_22_8 10321 12261 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1040_22 HRGMv2_1040_22_9 12627 14240 + 3.A.1.5.27
TC HRGMv2_1040_22 HRGMv2_1040_22_10 14398 15354 + 3.A.1.5.38
TC HRGMv2_1040_22 HRGMv2_1040_22_11 15358 17373 + 3.A.1.5.25
TC HRGMv2_1040_22 HRGMv2_1040_22_12 17374 18201 + 3.A.1.5.27
CAZyme HRGMv2_1040_22 HRGMv2_1040_22_13 18333 19259 + CE7
Gene ID: HRGMv2_1040_22_7
Type: TC
Location: 8632 - 10314 (+)
Gene ID: HRGMv2_1040_22_8
Type: pfam
Location: 10321 - 12261 (+)
Gene ID: HRGMv2_1040_22_9
Type: TC
Location: 12627 - 14240 (+)
Gene ID: HRGMv2_1040_22_10
Type: TC
Location: 14398 - 15354 (+)
Gene ID: HRGMv2_1040_22_11
Type: TC
Location: 15358 - 17373 (+)
Gene ID: HRGMv2_1040_22_12
Type: TC
Location: 17374 - 18201 (+)
Gene ID: HRGMv2_1040_22_13
Type: CAZyme
Location: 18333 - 19259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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