dbCAN HGM

Cluster: HRGMv2_1040_CGC17

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1040_50	HRGMv2_1040_50_2	916	4311	-	CBM13 \| CBM13 \| CBM13 \| CBM13 \| CBM13
CAZyme	HRGMv2_1040_50	HRGMv2_1040_50_3	4810	5856	+	GT81
CAZyme	HRGMv2_1040_50	HRGMv2_1040_50_4	5888	7123	-	GT4
CAZyme	HRGMv2_1040_50	HRGMv2_1040_50_5	7145	8203	-	GT2
CAZyme	HRGMv2_1040_50	HRGMv2_1040_50_6	8212	9327	-	GT2
TC	HRGMv2_1040_50	HRGMv2_1040_50_7	9329	10084	-	3.A.1.103.1
TC	HRGMv2_1040_50	HRGMv2_1040_50_8	10094	10906	-	3.A.1.103.4

Gene ID: HRGMv2_1040_50_2
Type: CAZyme
Location: 916 - 4311 (-)

Gene ID: HRGMv2_1040_50_3
Type: CAZyme
Location: 4810 - 5856 (+)

Gene ID: HRGMv2_1040_50_4
Type: CAZyme
Location: 5888 - 7123 (-)

Gene ID: HRGMv2_1040_50_5
Type: CAZyme
Location: 7145 - 8203 (-)

Gene ID: HRGMv2_1040_50_6
Type: CAZyme
Location: 8212 - 9327 (-)

Gene ID: HRGMv2_1040_50_7
Type: TC
Location: 9329 - 10084 (-)

Gene ID: HRGMv2_1040_50_8
Type: TC
Location: 10094 - 10906 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1040_50_4	vegetarian > omnivore	1.62659	0.04520
HRGMv2_1040_50_4	vegetarian > vegan	3.21468	0.01282
HRGMv2_1040_50_5	vegetarian > omnivore	2.01424	0.04520
HRGMv2_1040_50_5	vegetarian > vegan	3.46435	0.00701
HRGMv2_1040_50_6	vegetarian > omnivore	2.18260	0.04520
HRGMv2_1040_50_7	vegetarian > vegan	1.59307	0.00701
HRGMv2_1040_50_8	vegetarian > vegan	2.70191	0.04281