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Cluster: HRGMv2_1039_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1039_22 HRGMv2_1039_22_3 2863 4368 + GH77
CAZyme HRGMv2_1039_22 HRGMv2_1039_22_4 4498 6765 + GT35
TC HRGMv2_1039_22 HRGMv2_1039_22_5 7222 8421 - 3.A.1.1.22
TC HRGMv2_1039_22 HRGMv2_1039_22_6 8490 9329 - 3.A.1.1.45
TC HRGMv2_1039_22 HRGMv2_1039_22_7 9329 10183 - 3.A.1.1.45
TC HRGMv2_1039_22 HRGMv2_1039_22_8 10271 11587 - 3.A.1.1.45
TF HRGMv2_1039_22 HRGMv2_1039_22_9 11894 12613 - GntR
NULL(UNKNOWN) HRGMv2_1039_22 HRGMv2_1039_22_10 12697 12816 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1039_22 HRGMv2_1039_22_11 12838 15288 + 4.A.1.1.8
Gene ID: HRGMv2_1039_22_3
Type: CAZyme
Location: 2863 - 4368 (+)
Gene ID: HRGMv2_1039_22_4
Type: CAZyme
Location: 4498 - 6765 (+)
Gene ID: HRGMv2_1039_22_5
Type: TC
Location: 7222 - 8421 (-)
Gene ID: HRGMv2_1039_22_6
Type: TC
Location: 8490 - 9329 (-)
Gene ID: HRGMv2_1039_22_7
Type: TC
Location: 9329 - 10183 (-)
Gene ID: HRGMv2_1039_22_8
Type: TC
Location: 10271 - 11587 (-)
Gene ID: HRGMv2_1039_22_9
Type: TF
Location: 11894 - 12613 (-)
Gene ID: HRGMv2_1039_22_10
Type:
Location: 12697 - 12816 (-)
Gene ID: HRGMv2_1039_22_11
Type: TC
Location: 12838 - 15288 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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