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Cluster: HRGMv2_1039_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1039_41 HRGMv2_1039_41_4 2580 3023 + 4.A.6.1.16
pfam HRGMv2_1039_41 HRGMv2_1039_41_5 3023 3304 + YajC
TC HRGMv2_1039_41 HRGMv2_1039_41_6 3341 3823 + 4.A.6.1.4
TC HRGMv2_1039_41 HRGMv2_1039_41_7 3914 4714 + 4.A.6.1.4
TC HRGMv2_1039_41 HRGMv2_1039_41_8 4704 5786 + 4.A.6.1.4
TF HRGMv2_1039_41 HRGMv2_1039_41_9 5971 6702 + GntR
STP HRGMv2_1039_41 HRGMv2_1039_41_10 6817 7983 + SIS | SIS
CAZyme HRGMv2_1039_41 HRGMv2_1039_41_11 8102 9271 + CE9
Gene ID: HRGMv2_1039_41_4
Type: TC
Location: 2580 - 3023 (+)
Gene ID: HRGMv2_1039_41_5
Type: pfam
Location: 3023 - 3304 (+)
Gene ID: HRGMv2_1039_41_6
Type: TC
Location: 3341 - 3823 (+)
Gene ID: HRGMv2_1039_41_7
Type: TC
Location: 3914 - 4714 (+)
Gene ID: HRGMv2_1039_41_8
Type: TC
Location: 4704 - 5786 (+)
Gene ID: HRGMv2_1039_41_9
Type: TF
Location: 5971 - 6702 (+)
Gene ID: HRGMv2_1039_41_10
Type: STP
Location: 6817 - 7983 (+)
Gene ID: HRGMv2_1039_41_11
Type: CAZyme
Location: 8102 - 9271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1039_41_5 vegan > omnivore 1.18024 0.00566

🧭 Explore Read Mapping of CGC

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