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Cluster: HRGMv2_1038_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1038_28 HRGMv2_1038_28_5 7416 9836 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_1038_28 HRGMv2_1038_28_6 9891 10007 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_1038_28 HRGMv2_1038_28_7 10094 10813 + GntR
TC HRGMv2_1038_28 HRGMv2_1038_28_8 11120 12436 + 3.A.1.1.45
TC HRGMv2_1038_28 HRGMv2_1038_28_9 12524 13378 + 3.A.1.1.45
TC HRGMv2_1038_28 HRGMv2_1038_28_10 13378 14217 + 3.A.1.1.45
TC HRGMv2_1038_28 HRGMv2_1038_28_11 14286 15482 + 3.A.1.1.22
CAZyme HRGMv2_1038_28 HRGMv2_1038_28_12 16018 18285 - GT35
CAZyme HRGMv2_1038_28 HRGMv2_1038_28_13 18415 19920 - GH77
Gene ID: HRGMv2_1038_28_5
Type: TC
Location: 7416 - 9836 (-)
Gene ID: HRGMv2_1038_28_6
Type:
Location: 9891 - 10007 (+)
Gene ID: HRGMv2_1038_28_7
Type: TF
Location: 10094 - 10813 (+)
Gene ID: HRGMv2_1038_28_8
Type: TC
Location: 11120 - 12436 (+)
Gene ID: HRGMv2_1038_28_9
Type: TC
Location: 12524 - 13378 (+)
Gene ID: HRGMv2_1038_28_10
Type: TC
Location: 13378 - 14217 (+)
Gene ID: HRGMv2_1038_28_11
Type: TC
Location: 14286 - 15482 (+)
Gene ID: HRGMv2_1038_28_12
Type: CAZyme
Location: 16018 - 18285 (-)
Gene ID: HRGMv2_1038_28_13
Type: CAZyme
Location: 18415 - 19920 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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