Cluster: HRGMv2_1038_CGC14

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1038_21	HRGMv2_1038_21_2	553	1797	-	GT4
pfam	HRGMv2_1038_21	HRGMv2_1038_21_3	1810	2574	-	BcrAD_BadFG
pfam	HRGMv2_1038_21	HRGMv2_1038_21_4	2679	3842	-	HGD-D
TC	HRGMv2_1038_21	HRGMv2_1038_21_5	3921	4706	-	3.A.1.5.36
TC	HRGMv2_1038_21	HRGMv2_1038_21_6	4693	5691	-	3.A.1.5.35
TC	HRGMv2_1038_21	HRGMv2_1038_21_7	5695	6522	-	3.A.1.5.39
TC	HRGMv2_1038_21	HRGMv2_1038_21_8	6522	7475	-	3.A.1.5.11
TC	HRGMv2_1038_21	HRGMv2_1038_21_9	7563	9176	-	3.A.1.5.11
pfam	HRGMv2_1038_21	HRGMv2_1038_21_10	9412	10695	-	HGD-D
TC	HRGMv2_1038_21	HRGMv2_1038_21_11	11143	12213	-	3.A.1.1.3
TC	HRGMv2_1038_21	HRGMv2_1038_21_12	12217	13698	-	3.A.1.8.1

Gene ID: HRGMv2_1038_21_2
Type: CAZyme
Location: 553 - 1797 (-)

Gene ID: HRGMv2_1038_21_3
Type: pfam
Location: 1810 - 2574 (-)

Gene ID: HRGMv2_1038_21_4
Type: pfam
Location: 2679 - 3842 (-)

Gene ID: HRGMv2_1038_21_5
Type: TC
Location: 3921 - 4706 (-)

Gene ID: HRGMv2_1038_21_6
Type: TC
Location: 4693 - 5691 (-)

Gene ID: HRGMv2_1038_21_7
Type: TC
Location: 5695 - 6522 (-)

Gene ID: HRGMv2_1038_21_8
Type: TC
Location: 6522 - 7475 (-)

Gene ID: HRGMv2_1038_21_9
Type: TC
Location: 7563 - 9176 (-)

Gene ID: HRGMv2_1038_21_10
Type: pfam
Location: 9412 - 10695 (-)

Gene ID: HRGMv2_1038_21_11
Type: TC
Location: 11143 - 12213 (-)

Gene ID: HRGMv2_1038_21_12
Type: TC
Location: 12217 - 13698 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1038_21_5	vegan > omnivore	3.22118	0.01416
HRGMv2_1038_21_7	vegan > omnivore	3.78738	0.01416
HRGMv2_1038_21_8	vegan > omnivore	2.86056	0.01416
HRGMv2_1038_21_9	vegan > omnivore	3.13611	0.01416