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Cluster: HRGMv2_1038_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1038_13 HRGMv2_1038_13_17 16625 17509 - CE7
TC HRGMv2_1038_13 HRGMv2_1038_13_18 17683 18510 - 3.A.1.5.27
TC HRGMv2_1038_13 HRGMv2_1038_13_19 18511 20526 - 3.A.1.5.25
TC HRGMv2_1038_13 HRGMv2_1038_13_20 20530 21486 - 3.A.1.5.38
TC HRGMv2_1038_13 HRGMv2_1038_13_21 21642 23255 - 3.A.1.5.27
pfam HRGMv2_1038_13 HRGMv2_1038_13_22 23621 25561 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1038_13 HRGMv2_1038_13_23 25568 27250 - 2.A.66.4.4
Gene ID: HRGMv2_1038_13_17
Type: CAZyme
Location: 16625 - 17509 (-)
Gene ID: HRGMv2_1038_13_18
Type: TC
Location: 17683 - 18510 (-)
Gene ID: HRGMv2_1038_13_19
Type: TC
Location: 18511 - 20526 (-)
Gene ID: HRGMv2_1038_13_20
Type: TC
Location: 20530 - 21486 (-)
Gene ID: HRGMv2_1038_13_21
Type: TC
Location: 21642 - 23255 (-)
Gene ID: HRGMv2_1038_13_22
Type: pfam
Location: 23621 - 25561 (-)
Gene ID: HRGMv2_1038_13_23
Type: TC
Location: 25568 - 27250 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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