dbCAN Logo

Cluster: HRGMv2_1037_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1037_2 HRGMv2_1037_2_10 8922 10343 - GH1
TC HRGMv2_1037_2 HRGMv2_1037_2_11 10419 12176 - 4.A.3.1.1
TF HRGMv2_1037_2 HRGMv2_1037_2_12 12452 13462 + LacI
CAZyme HRGMv2_1037_2 HRGMv2_1037_2_13 13576 15015 - GH1
TC HRGMv2_1037_2 HRGMv2_1037_2_14 15082 16854 - 4.A.3.1.1
TF HRGMv2_1037_2 HRGMv2_1037_2_15 17211 18215 + LacI
TC HRGMv2_1037_2 HRGMv2_1037_2_16 18430 18768 + 4.A.3.1.2
Gene ID: HRGMv2_1037_2_10
Type: CAZyme
Location: 8922 - 10343 (-)
Gene ID: HRGMv2_1037_2_11
Type: TC
Location: 10419 - 12176 (-)
Gene ID: HRGMv2_1037_2_12
Type: TF
Location: 12452 - 13462 (+)
Gene ID: HRGMv2_1037_2_13
Type: CAZyme
Location: 13576 - 15015 (-)
Gene ID: HRGMv2_1037_2_14
Type: TC
Location: 15082 - 16854 (-)
Gene ID: HRGMv2_1037_2_15
Type: TF
Location: 17211 - 18215 (+)
Gene ID: HRGMv2_1037_2_16
Type: TC
Location: 18430 - 18768 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List