dbCAN HGM

Cluster: HRGMv2_1034_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1034_83	HRGMv2_1034_83_1	2	241	+	3.A.1.103.1
CAZyme	HRGMv2_1034_83	HRGMv2_1034_83_2	243	1358	+	GT2
CAZyme	HRGMv2_1034_83	HRGMv2_1034_83_3	1367	2425	+	GT2
CAZyme	HRGMv2_1034_83	HRGMv2_1034_83_4	2447	3682	+	GT4
pfam	HRGMv2_1034_83	HRGMv2_1034_83_5	3737	4198	+	IU_nuc_hydro
CAZyme	HRGMv2_1034_83	HRGMv2_1034_83_6	4289	5251	-	GT81
TC	HRGMv2_1034_83	HRGMv2_1034_83_7	5374	6216	+	3.A.1.103.1

Gene ID: HRGMv2_1034_83_1
Type: TC
Location: 2 - 241 (+)

Gene ID: HRGMv2_1034_83_2
Type: CAZyme
Location: 243 - 1358 (+)

Gene ID: HRGMv2_1034_83_3
Type: CAZyme
Location: 1367 - 2425 (+)

Gene ID: HRGMv2_1034_83_4
Type: CAZyme
Location: 2447 - 3682 (+)

Gene ID: HRGMv2_1034_83_5
Type: pfam
Location: 3737 - 4198 (+)

Gene ID: HRGMv2_1034_83_6
Type: CAZyme
Location: 4289 - 5251 (-)

Gene ID: HRGMv2_1034_83_7
Type: TC
Location: 5374 - 6216 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1034_83_2	vegetarian > omnivore	1.80827	0.02024
HRGMv2_1034_83_2	vegetarian > vegan	2.80440	0.01442
HRGMv2_1034_83_3	vegetarian > omnivore	1.84452	0.02024
HRGMv2_1034_83_3	vegetarian > vegan	3.96604	0.01442
HRGMv2_1034_83_4	vegetarian > omnivore	1.73839	0.02024
HRGMv2_1034_83_4	vegetarian > vegan	3.99322	0.01442