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Cluster: HRGMv2_1034_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1034_15 HRGMv2_1034_15_3 1445 1888 + 4.A.6.1.16
pfam HRGMv2_1034_15 HRGMv2_1034_15_4 1888 2169 + YajC
TC HRGMv2_1034_15 HRGMv2_1034_15_5 2206 2688 + 4.A.6.1.4
TC HRGMv2_1034_15 HRGMv2_1034_15_6 2779 3579 + 4.A.6.1.4
TC HRGMv2_1034_15 HRGMv2_1034_15_7 3569 4651 + 4.A.6.1.4
TF HRGMv2_1034_15 HRGMv2_1034_15_8 4836 5567 + GntR
STP HRGMv2_1034_15 HRGMv2_1034_15_9 5682 6848 + SIS | SIS
CAZyme HRGMv2_1034_15 HRGMv2_1034_15_10 6969 8138 + CE9
Gene ID: HRGMv2_1034_15_3
Type: TC
Location: 1445 - 1888 (+)
Gene ID: HRGMv2_1034_15_4
Type: pfam
Location: 1888 - 2169 (+)
Gene ID: HRGMv2_1034_15_5
Type: TC
Location: 2206 - 2688 (+)
Gene ID: HRGMv2_1034_15_6
Type: TC
Location: 2779 - 3579 (+)
Gene ID: HRGMv2_1034_15_7
Type: TC
Location: 3569 - 4651 (+)
Gene ID: HRGMv2_1034_15_8
Type: TF
Location: 4836 - 5567 (+)
Gene ID: HRGMv2_1034_15_9
Type: STP
Location: 5682 - 6848 (+)
Gene ID: HRGMv2_1034_15_10
Type: CAZyme
Location: 6969 - 8138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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