dbCAN HGM

Cluster: HRGMv2_1033_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_1033_42	HRGMv2_1033_42_6	7329	7997	-	3.A.1.103.5
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_7	8120	9082	+	GT81
pfam	HRGMv2_1033_42	HRGMv2_1033_42_8	8957	9634	-	IU_nuc_hydro
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_9	9691	10926	-	GT4
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_10	10948	12006	-	GT2
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_11	12015	13130	-	GT2
TC	HRGMv2_1033_42	HRGMv2_1033_42_12	13132	13887	-	3.A.1.103.1
TC	HRGMv2_1033_42	HRGMv2_1033_42_13	13897	14709	-	3.A.1.103.4
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_14	14866	16002	-	GT2
CAZyme	HRGMv2_1033_42	HRGMv2_1033_42_15	16198	18183	+	GT2

Gene ID: HRGMv2_1033_42_6
Type: TC
Location: 7329 - 7997 (-)

Gene ID: HRGMv2_1033_42_7
Type: CAZyme
Location: 8120 - 9082 (+)

Gene ID: HRGMv2_1033_42_8
Type: pfam
Location: 8957 - 9634 (-)

Gene ID: HRGMv2_1033_42_9
Type: CAZyme
Location: 9691 - 10926 (-)

Gene ID: HRGMv2_1033_42_10
Type: CAZyme
Location: 10948 - 12006 (-)

Gene ID: HRGMv2_1033_42_11
Type: CAZyme
Location: 12015 - 13130 (-)

Gene ID: HRGMv2_1033_42_12
Type: TC
Location: 13132 - 13887 (-)

Gene ID: HRGMv2_1033_42_13
Type: TC
Location: 13897 - 14709 (-)

Gene ID: HRGMv2_1033_42_14
Type: CAZyme
Location: 14866 - 16002 (-)

Gene ID: HRGMv2_1033_42_15
Type: CAZyme
Location: 16198 - 18183 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1033_42_9	vegetarian > vegan	3.98617	0.04105
HRGMv2_1033_42_10	vegetarian > vegan	4.39374	0.04105
HRGMv2_1033_42_11	vegetarian > vegan	2.98731	0.04105
HRGMv2_1033_42_12	vegetarian > vegan	1.13253	0.04105
HRGMv2_1033_42_13	vegetarian > vegan	2.96955	0.04105
HRGMv2_1033_42_14	vegetarian > vegan	2.54753	0.04105