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Cluster: HRGMv2_1033_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1033_38 HRGMv2_1033_38_12 9293 10462 - CE9
STP HRGMv2_1033_38 HRGMv2_1033_38_13 10581 11747 - SIS | SIS
TF HRGMv2_1033_38 HRGMv2_1033_38_14 11862 12593 - GntR
TC HRGMv2_1033_38 HRGMv2_1033_38_15 12778 13860 - 4.A.6.1.4
TC HRGMv2_1033_38 HRGMv2_1033_38_16 13850 14650 - 4.A.6.1.4
TC HRGMv2_1033_38 HRGMv2_1033_38_17 14741 15223 - 4.A.6.1.4
pfam HRGMv2_1033_38 HRGMv2_1033_38_18 15260 15541 - YajC
TC HRGMv2_1033_38 HRGMv2_1033_38_19 15541 15984 - 4.A.6.1.16
Gene ID: HRGMv2_1033_38_12
Type: CAZyme
Location: 9293 - 10462 (-)
Gene ID: HRGMv2_1033_38_13
Type: STP
Location: 10581 - 11747 (-)
Gene ID: HRGMv2_1033_38_14
Type: TF
Location: 11862 - 12593 (-)
Gene ID: HRGMv2_1033_38_15
Type: TC
Location: 12778 - 13860 (-)
Gene ID: HRGMv2_1033_38_16
Type: TC
Location: 13850 - 14650 (-)
Gene ID: HRGMv2_1033_38_17
Type: TC
Location: 14741 - 15223 (-)
Gene ID: HRGMv2_1033_38_18
Type: pfam
Location: 15260 - 15541 (-)
Gene ID: HRGMv2_1033_38_19
Type: TC
Location: 15541 - 15984 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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