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Cluster: HRGMv2_1032_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1032_19 HRGMv2_1032_19_17 17285 18169 - CE7
TC HRGMv2_1032_19 HRGMv2_1032_19_18 18343 19170 - 3.A.1.5.27
TC HRGMv2_1032_19 HRGMv2_1032_19_19 19171 21186 - 3.A.1.5.25
TC HRGMv2_1032_19 HRGMv2_1032_19_20 21190 22146 - 3.A.1.5.38
TC HRGMv2_1032_19 HRGMv2_1032_19_21 22302 23915 - 3.A.1.5.27
pfam HRGMv2_1032_19 HRGMv2_1032_19_22 24281 26221 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1032_19 HRGMv2_1032_19_23 26228 27910 - 2.A.66.4.4
Gene ID: HRGMv2_1032_19_17
Type: CAZyme
Location: 17285 - 18169 (-)
Gene ID: HRGMv2_1032_19_18
Type: TC
Location: 18343 - 19170 (-)
Gene ID: HRGMv2_1032_19_19
Type: TC
Location: 19171 - 21186 (-)
Gene ID: HRGMv2_1032_19_20
Type: TC
Location: 21190 - 22146 (-)
Gene ID: HRGMv2_1032_19_21
Type: TC
Location: 22302 - 23915 (-)
Gene ID: HRGMv2_1032_19_22
Type: pfam
Location: 24281 - 26221 (-)
Gene ID: HRGMv2_1032_19_23
Type: TC
Location: 26228 - 27910 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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