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Cluster: HRGMv2_1032_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1032_51 HRGMv2_1032_51_3 1674 3431 + 4.A.3.1.1
CAZyme HRGMv2_1032_51 HRGMv2_1032_51_4 3507 4928 + GH1
TF HRGMv2_1032_51 HRGMv2_1032_51_5 5689 6453 - HTH_DeoR
sulfatase HRGMv2_1032_51 HRGMv2_1032_51_6 6659 7711 + S1_4
TC HRGMv2_1032_51 HRGMv2_1032_51_7 7933 8427 - 4.A.6.1.5
pfam HRGMv2_1032_51 HRGMv2_1032_51_8 8871 9344 - DUF386
CAZyme HRGMv2_1032_51 HRGMv2_1032_51_9 9377 10546 - CE9
TF HRGMv2_1032_51 HRGMv2_1032_51_10 10690 11421 - GntR
TC HRGMv2_1032_51 HRGMv2_1032_51_11 11654 12229 - 4.A.1.1.7
Gene ID: HRGMv2_1032_51_3
Type: TC
Location: 1674 - 3431 (+)
Gene ID: HRGMv2_1032_51_4
Type: CAZyme
Location: 3507 - 4928 (+)
Gene ID: HRGMv2_1032_51_5
Type: TF
Location: 5689 - 6453 (-)
Gene ID: HRGMv2_1032_51_6
Type: sulfatase
Location: 6659 - 7711 (+)
Gene ID: HRGMv2_1032_51_7
Type: TC
Location: 7933 - 8427 (-)
Gene ID: HRGMv2_1032_51_8
Type: pfam
Location: 8871 - 9344 (-)
Gene ID: HRGMv2_1032_51_9
Type: CAZyme
Location: 9377 - 10546 (-)
Gene ID: HRGMv2_1032_51_10
Type: TF
Location: 10690 - 11421 (-)
Gene ID: HRGMv2_1032_51_11
Type: TC
Location: 11654 - 12229 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1032_51_9 vegetarian > vegan 1.42380 0.00855
HRGMv2_1032_51_10 vegetarian > vegan 3.14636 0.00855

🧭 Explore Read Mapping of CGC

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