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Cluster: HRGMv2_1031_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1031_23 HRGMv2_1031_23_10 13632 15314 + 2.A.66.4.4
pfam HRGMv2_1031_23 HRGMv2_1031_23_11 15321 17261 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1031_23 HRGMv2_1031_23_12 17627 19240 + 3.A.1.5.27
TC HRGMv2_1031_23 HRGMv2_1031_23_13 19396 20352 + 3.A.1.5.38
TC HRGMv2_1031_23 HRGMv2_1031_23_14 20356 22371 + 3.A.1.5.25
TC HRGMv2_1031_23 HRGMv2_1031_23_15 22372 23199 + 3.A.1.5.27
CAZyme HRGMv2_1031_23 HRGMv2_1031_23_16 23373 24257 + CE7
Gene ID: HRGMv2_1031_23_10
Type: TC
Location: 13632 - 15314 (+)
Gene ID: HRGMv2_1031_23_11
Type: pfam
Location: 15321 - 17261 (+)
Gene ID: HRGMv2_1031_23_12
Type: TC
Location: 17627 - 19240 (+)
Gene ID: HRGMv2_1031_23_13
Type: TC
Location: 19396 - 20352 (+)
Gene ID: HRGMv2_1031_23_14
Type: TC
Location: 20356 - 22371 (+)
Gene ID: HRGMv2_1031_23_15
Type: TC
Location: 22372 - 23199 (+)
Gene ID: HRGMv2_1031_23_16
Type: CAZyme
Location: 23373 - 24257 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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