Cluster: HRGMv2_1031_CGC17

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1031_22	HRGMv2_1031_22_6	17064	18296	-	GT4
pfam	HRGMv2_1031_22	HRGMv2_1031_22_7	18310	19074	-	BcrAD_BadFG
pfam	HRGMv2_1031_22	HRGMv2_1031_22_8	19125	20288	-	HGD-D
TC	HRGMv2_1031_22	HRGMv2_1031_22_9	20366	21151	-	3.A.1.5.36
TC	HRGMv2_1031_22	HRGMv2_1031_22_10	21138	22136	-	3.A.1.5.35
TC	HRGMv2_1031_22	HRGMv2_1031_22_11	22140	22967	-	3.A.1.5.39
TC	HRGMv2_1031_22	HRGMv2_1031_22_12	22967	23920	-	3.A.1.5.11
TC	HRGMv2_1031_22	HRGMv2_1031_22_13	24009	25622	-	3.A.1.5.11
pfam	HRGMv2_1031_22	HRGMv2_1031_22_14	25858	27141	-	HGD-D
TC	HRGMv2_1031_22	HRGMv2_1031_22_15	27573	28643	-	3.A.1.1.3
TC	HRGMv2_1031_22	HRGMv2_1031_22_16	28650	30089	-	3.A.1.8.1

Gene ID: HRGMv2_1031_22_6
Type: CAZyme
Location: 17064 - 18296 (-)

Gene ID: HRGMv2_1031_22_7
Type: pfam
Location: 18310 - 19074 (-)

Gene ID: HRGMv2_1031_22_8
Type: pfam
Location: 19125 - 20288 (-)

Gene ID: HRGMv2_1031_22_9
Type: TC
Location: 20366 - 21151 (-)

Gene ID: HRGMv2_1031_22_10
Type: TC
Location: 21138 - 22136 (-)

Gene ID: HRGMv2_1031_22_11
Type: TC
Location: 22140 - 22967 (-)

Gene ID: HRGMv2_1031_22_12
Type: TC
Location: 22967 - 23920 (-)

Gene ID: HRGMv2_1031_22_13
Type: TC
Location: 24009 - 25622 (-)

Gene ID: HRGMv2_1031_22_14
Type: pfam
Location: 25858 - 27141 (-)

Gene ID: HRGMv2_1031_22_15
Type: TC
Location: 27573 - 28643 (-)

Gene ID: HRGMv2_1031_22_16
Type: TC
Location: 28650 - 30089 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1031_22_9	vegan > omnivore	2.73994	0.01287
HRGMv2_1031_22_11	vegan > omnivore	3.05196	0.01287
HRGMv2_1031_22_12	vegan > omnivore	2.62228	0.01287
HRGMv2_1031_22_13	vegan > omnivore	3.76763	0.01287