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Cluster: HRGMv2_1031_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1031_13 HRGMv2_1031_13_40 46378 48714 - 3.A.3.5.15
TC HRGMv2_1031_13 HRGMv2_1031_13_41 49193 51445 + 1.I.1.1.3
TC HRGMv2_1031_13 HRGMv2_1031_13_42 51791 52321 + 4.A.1.2.2
pfam HRGMv2_1031_13 HRGMv2_1031_13_43 52328 53194 + PRD | PRD | CAT_RBD
TC HRGMv2_1031_13 HRGMv2_1031_13_44 53294 54910 + 4.A.1.1.3
CAZyme HRGMv2_1031_13 HRGMv2_1031_13_45 54914 56296 + GH4
STP HRGMv2_1031_13 HRGMv2_1031_13_46 56622 58454 + Pyr_redox_2
TC HRGMv2_1031_13 HRGMv2_1031_13_47 58448 60259 + 3.D.1.5.1
NULL(UNKNOWN) HRGMv2_1031_13 HRGMv2_1031_13_48 60262 61320 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1031_13 HRGMv2_1031_13_49 61324 62700 + 3.A.1.17.10
Gene ID: HRGMv2_1031_13_40
Type: TC
Location: 46378 - 48714 (-)
Gene ID: HRGMv2_1031_13_41
Type: TC
Location: 49193 - 51445 (+)
Gene ID: HRGMv2_1031_13_42
Type: TC
Location: 51791 - 52321 (+)
Gene ID: HRGMv2_1031_13_43
Type: pfam
Location: 52328 - 53194 (+)
Gene ID: HRGMv2_1031_13_44
Type: TC
Location: 53294 - 54910 (+)
Gene ID: HRGMv2_1031_13_45
Type: CAZyme
Location: 54914 - 56296 (+)
Gene ID: HRGMv2_1031_13_46
Type: STP
Location: 56622 - 58454 (+)
Gene ID: HRGMv2_1031_13_47
Type: TC
Location: 58448 - 60259 (+)
Gene ID: HRGMv2_1031_13_48
Type:
Location: 60262 - 61320 (+)
Gene ID: HRGMv2_1031_13_49
Type: TC
Location: 61324 - 62700 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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