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Cluster: HRGMv2_1031_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1031_3 HRGMv2_1031_3_175 191619 193124 + GH77
CAZyme HRGMv2_1031_3 HRGMv2_1031_3_176 193254 195521 + GT35
TC HRGMv2_1031_3 HRGMv2_1031_3_177 195978 197174 - 3.A.1.1.22
TC HRGMv2_1031_3 HRGMv2_1031_3_178 197243 198082 - 3.A.1.1.45
TC HRGMv2_1031_3 HRGMv2_1031_3_179 198082 198936 - 3.A.1.1.45
TC HRGMv2_1031_3 HRGMv2_1031_3_180 199024 200340 - 3.A.1.1.45
TF HRGMv2_1031_3 HRGMv2_1031_3_181 200647 201366 - GntR
NULL(UNKNOWN) HRGMv2_1031_3 HRGMv2_1031_3_182 201453 201569 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1031_3 HRGMv2_1031_3_183 201624 204044 + 4.A.1.1.8
Gene ID: HRGMv2_1031_3_175
Type: CAZyme
Location: 191619 - 193124 (+)
Gene ID: HRGMv2_1031_3_176
Type: CAZyme
Location: 193254 - 195521 (+)
Gene ID: HRGMv2_1031_3_177
Type: TC
Location: 195978 - 197174 (-)
Gene ID: HRGMv2_1031_3_178
Type: TC
Location: 197243 - 198082 (-)
Gene ID: HRGMv2_1031_3_179
Type: TC
Location: 198082 - 198936 (-)
Gene ID: HRGMv2_1031_3_180
Type: TC
Location: 199024 - 200340 (-)
Gene ID: HRGMv2_1031_3_181
Type: TF
Location: 200647 - 201366 (-)
Gene ID: HRGMv2_1031_3_182
Type:
Location: 201453 - 201569 (-)
Gene ID: HRGMv2_1031_3_183
Type: TC
Location: 201624 - 204044 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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