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Cluster: HRGMv2_1028_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1028_24 HRGMv2_1028_24_6 3913 4797 - CE7
TC HRGMv2_1028_24 HRGMv2_1028_24_7 4971 5798 - 3.A.1.5.27
TC HRGMv2_1028_24 HRGMv2_1028_24_8 5799 7814 - 3.A.1.5.25
TC HRGMv2_1028_24 HRGMv2_1028_24_9 7818 8774 - 3.A.1.5.38
TC HRGMv2_1028_24 HRGMv2_1028_24_10 8930 10543 - 3.A.1.5.27
pfam HRGMv2_1028_24 HRGMv2_1028_24_11 10909 12849 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1028_24 HRGMv2_1028_24_12 12856 14538 - 2.A.66.4.4
Gene ID: HRGMv2_1028_24_6
Type: CAZyme
Location: 3913 - 4797 (-)
Gene ID: HRGMv2_1028_24_7
Type: TC
Location: 4971 - 5798 (-)
Gene ID: HRGMv2_1028_24_8
Type: TC
Location: 5799 - 7814 (-)
Gene ID: HRGMv2_1028_24_9
Type: TC
Location: 7818 - 8774 (-)
Gene ID: HRGMv2_1028_24_10
Type: TC
Location: 8930 - 10543 (-)
Gene ID: HRGMv2_1028_24_11
Type: pfam
Location: 10909 - 12849 (-)
Gene ID: HRGMv2_1028_24_12
Type: TC
Location: 12856 - 14538 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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