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Cluster: HRGMv2_1027_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1027_24 HRGMv2_1027_24_6 4639 4977 - 4.A.3.1.2
TF HRGMv2_1027_24 HRGMv2_1027_24_7 5192 6196 - LacI
TC HRGMv2_1027_24 HRGMv2_1027_24_8 6553 8328 + 4.A.3.1.1
CAZyme HRGMv2_1027_24 HRGMv2_1027_24_9 8395 9834 + GH1
TF HRGMv2_1027_24 HRGMv2_1027_24_10 10102 11139 - LacI
CAZyme HRGMv2_1027_24 HRGMv2_1027_24_11 11481 12923 + GH1
TC HRGMv2_1027_24 HRGMv2_1027_24_12 13100 14860 + 4.A.3.1.1
TF HRGMv2_1027_24 HRGMv2_1027_24_13 15034 16044 - LacI
TC HRGMv2_1027_24 HRGMv2_1027_24_14 16320 18077 + 4.A.3.1.1
Gene ID: HRGMv2_1027_24_6
Type: TC
Location: 4639 - 4977 (-)
Gene ID: HRGMv2_1027_24_7
Type: TF
Location: 5192 - 6196 (-)
Gene ID: HRGMv2_1027_24_8
Type: TC
Location: 6553 - 8328 (+)
Gene ID: HRGMv2_1027_24_9
Type: CAZyme
Location: 8395 - 9834 (+)
Gene ID: HRGMv2_1027_24_10
Type: TF
Location: 10102 - 11139 (-)
Gene ID: HRGMv2_1027_24_11
Type: CAZyme
Location: 11481 - 12923 (+)
Gene ID: HRGMv2_1027_24_12
Type: TC
Location: 13100 - 14860 (+)
Gene ID: HRGMv2_1027_24_13
Type: TF
Location: 15034 - 16044 (-)
Gene ID: HRGMv2_1027_24_14
Type: TC
Location: 16320 - 18077 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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