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Cluster: HRGMv2_1027_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1027_55 HRGMv2_1027_55_1 2 361 - CE7
TC HRGMv2_1027_55 HRGMv2_1027_55_2 535 1362 - 3.A.1.5.27
TC HRGMv2_1027_55 HRGMv2_1027_55_3 1363 3378 - 3.A.1.5.25
TC HRGMv2_1027_55 HRGMv2_1027_55_4 3382 4338 - 3.A.1.5.38
TC HRGMv2_1027_55 HRGMv2_1027_55_5 4496 6109 - 3.A.1.5.27
pfam HRGMv2_1027_55 HRGMv2_1027_55_6 6463 8415 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1027_55 HRGMv2_1027_55_7 8422 10104 - 2.A.66.4.4
Gene ID: HRGMv2_1027_55_1
Type: CAZyme
Location: 2 - 361 (-)
Gene ID: HRGMv2_1027_55_2
Type: TC
Location: 535 - 1362 (-)
Gene ID: HRGMv2_1027_55_3
Type: TC
Location: 1363 - 3378 (-)
Gene ID: HRGMv2_1027_55_4
Type: TC
Location: 3382 - 4338 (-)
Gene ID: HRGMv2_1027_55_5
Type: TC
Location: 4496 - 6109 (-)
Gene ID: HRGMv2_1027_55_6
Type: pfam
Location: 6463 - 8415 (-)
Gene ID: HRGMv2_1027_55_7
Type: TC
Location: 8422 - 10104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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