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Cluster: HRGMv2_1026_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1026_42 HRGMv2_1026_42_10 8915 10273 - 2.A.33.1.1
pfam HRGMv2_1026_42 HRGMv2_1026_42_11 10538 11461 - DHH | DHHA2
STP HRGMv2_1026_42 HRGMv2_1026_42_12 11627 12580 - Glucokinase
TC HRGMv2_1026_42 HRGMv2_1026_42_13 12821 13153 - 4.A.3.2.3
TC HRGMv2_1026_42 HRGMv2_1026_42_14 13163 13465 - 4.A.3.2.9
TC HRGMv2_1026_42 HRGMv2_1026_42_15 13619 14971 - 4.A.3.2.2
CAZyme HRGMv2_1026_42 HRGMv2_1026_42_16 15092 16492 - GH1
Gene ID: HRGMv2_1026_42_10
Type: TC
Location: 8915 - 10273 (-)
Gene ID: HRGMv2_1026_42_11
Type: pfam
Location: 10538 - 11461 (-)
Gene ID: HRGMv2_1026_42_12
Type: STP
Location: 11627 - 12580 (-)
Gene ID: HRGMv2_1026_42_13
Type: TC
Location: 12821 - 13153 (-)
Gene ID: HRGMv2_1026_42_14
Type: TC
Location: 13163 - 13465 (-)
Gene ID: HRGMv2_1026_42_15
Type: TC
Location: 13619 - 14971 (-)
Gene ID: HRGMv2_1026_42_16
Type: CAZyme
Location: 15092 - 16492 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1026_42_14 vegan > omnivore 1.09502 0.00701

🧭 Explore Read Mapping of CGC

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