dbCAN Logo

Cluster: HRGMv2_1025_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1025_7 HRGMv2_1025_7_62 83706 84470 + 9.B.18.1.2
CAZyme HRGMv2_1025_7 HRGMv2_1025_7_63 84474 85391 + GT2
pfam HRGMv2_1025_7 HRGMv2_1025_7_64 85435 86706 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_1025_7 HRGMv2_1025_7_65 86712 88004 + GT4
pfam HRGMv2_1025_7 HRGMv2_1025_7_66 88004 88951 + C5-epim_C
CAZyme HRGMv2_1025_7 HRGMv2_1025_7_67 88948 90051 + GT4
pfam HRGMv2_1025_7 HRGMv2_1025_7_68 90048 91136 + EpsG
pfam HRGMv2_1025_7 HRGMv2_1025_7_69 91280 92227 + ATPgrasp_TupA
TC HRGMv2_1025_7 HRGMv2_1025_7_70 92312 93778 + 2.A.66.2.23
Gene ID: HRGMv2_1025_7_62
Type: TC
Location: 83706 - 84470 (+)
Gene ID: HRGMv2_1025_7_63
Type: CAZyme
Location: 84474 - 85391 (+)
Gene ID: HRGMv2_1025_7_64
Type: pfam
Location: 85435 - 86706 (+)
Gene ID: HRGMv2_1025_7_65
Type: CAZyme
Location: 86712 - 88004 (+)
Gene ID: HRGMv2_1025_7_66
Type: pfam
Location: 88004 - 88951 (+)
Gene ID: HRGMv2_1025_7_67
Type: CAZyme
Location: 88948 - 90051 (+)
Gene ID: HRGMv2_1025_7_68
Type: pfam
Location: 90048 - 91136 (+)
Gene ID: HRGMv2_1025_7_69
Type: pfam
Location: 91280 - 92227 (+)
Gene ID: HRGMv2_1025_7_70
Type: TC
Location: 92312 - 93778 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List