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Cluster: HRGMv2_1025_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1025_25 HRGMv2_1025_25_8 6882 7808 - CE7
TC HRGMv2_1025_25 HRGMv2_1025_25_9 7940 8767 - 3.A.1.5.27
TC HRGMv2_1025_25 HRGMv2_1025_25_10 8768 10783 - 3.A.1.5.25
TC HRGMv2_1025_25 HRGMv2_1025_25_11 10787 11743 - 3.A.1.5.38
TC HRGMv2_1025_25 HRGMv2_1025_25_12 11899 13512 - 3.A.1.5.27
pfam HRGMv2_1025_25 HRGMv2_1025_25_13 13878 15818 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1025_25 HRGMv2_1025_25_14 15825 17507 - 2.A.66.4.4
Gene ID: HRGMv2_1025_25_8
Type: CAZyme
Location: 6882 - 7808 (-)
Gene ID: HRGMv2_1025_25_9
Type: TC
Location: 7940 - 8767 (-)
Gene ID: HRGMv2_1025_25_10
Type: TC
Location: 8768 - 10783 (-)
Gene ID: HRGMv2_1025_25_11
Type: TC
Location: 10787 - 11743 (-)
Gene ID: HRGMv2_1025_25_12
Type: TC
Location: 11899 - 13512 (-)
Gene ID: HRGMv2_1025_25_13
Type: pfam
Location: 13878 - 15818 (-)
Gene ID: HRGMv2_1025_25_14
Type: TC
Location: 15825 - 17507 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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