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Cluster: HRGMv2_1025_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1025_12 HRGMv2_1025_12_54 49416 50921 + GH77
CAZyme HRGMv2_1025_12 HRGMv2_1025_12_55 51049 53316 + GT35
TC HRGMv2_1025_12 HRGMv2_1025_12_56 53773 54972 - 3.A.1.1.22
TC HRGMv2_1025_12 HRGMv2_1025_12_57 55041 55880 - 3.A.1.1.45
TC HRGMv2_1025_12 HRGMv2_1025_12_58 55880 56734 - 3.A.1.1.45
TC HRGMv2_1025_12 HRGMv2_1025_12_59 56822 58138 - 3.A.1.1.45
TF HRGMv2_1025_12 HRGMv2_1025_12_60 58445 59164 - GntR
NULL(UNKNOWN) HRGMv2_1025_12 HRGMv2_1025_12_61 59248 59367 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1025_12 HRGMv2_1025_12_62 59389 61839 + 4.A.1.1.8
Gene ID: HRGMv2_1025_12_54
Type: CAZyme
Location: 49416 - 50921 (+)
Gene ID: HRGMv2_1025_12_55
Type: CAZyme
Location: 51049 - 53316 (+)
Gene ID: HRGMv2_1025_12_56
Type: TC
Location: 53773 - 54972 (-)
Gene ID: HRGMv2_1025_12_57
Type: TC
Location: 55041 - 55880 (-)
Gene ID: HRGMv2_1025_12_58
Type: TC
Location: 55880 - 56734 (-)
Gene ID: HRGMv2_1025_12_59
Type: TC
Location: 56822 - 58138 (-)
Gene ID: HRGMv2_1025_12_60
Type: TF
Location: 58445 - 59164 (-)
Gene ID: HRGMv2_1025_12_61
Type:
Location: 59248 - 59367 (-)
Gene ID: HRGMv2_1025_12_62
Type: TC
Location: 59389 - 61839 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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