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Cluster: HRGMv2_1024_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1024_22 HRGMv2_1024_22_10 13596 15278 + 2.A.66.4.4
pfam HRGMv2_1024_22 HRGMv2_1024_22_11 15285 17225 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_1024_22 HRGMv2_1024_22_12 17590 19203 + 3.A.1.5.27
TC HRGMv2_1024_22 HRGMv2_1024_22_13 19359 20315 + 3.A.1.5.38
TC HRGMv2_1024_22 HRGMv2_1024_22_14 20319 22334 + 3.A.1.5.25
TC HRGMv2_1024_22 HRGMv2_1024_22_15 22335 23162 + 3.A.1.5.27
CAZyme HRGMv2_1024_22 HRGMv2_1024_22_16 23336 24220 + CE7
Gene ID: HRGMv2_1024_22_10
Type: TC
Location: 13596 - 15278 (+)
Gene ID: HRGMv2_1024_22_11
Type: pfam
Location: 15285 - 17225 (+)
Gene ID: HRGMv2_1024_22_12
Type: TC
Location: 17590 - 19203 (+)
Gene ID: HRGMv2_1024_22_13
Type: TC
Location: 19359 - 20315 (+)
Gene ID: HRGMv2_1024_22_14
Type: TC
Location: 20319 - 22334 (+)
Gene ID: HRGMv2_1024_22_15
Type: TC
Location: 22335 - 23162 (+)
Gene ID: HRGMv2_1024_22_16
Type: CAZyme
Location: 23336 - 24220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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