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Cluster: HRGMv2_1023_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1023_43 HRGMv2_1023_43_5 5430 6935 + GH77
CAZyme HRGMv2_1023_43 HRGMv2_1023_43_6 7064 9331 + GT35
TC HRGMv2_1023_43 HRGMv2_1023_43_7 9800 10996 - 3.A.1.1.22
TC HRGMv2_1023_43 HRGMv2_1023_43_8 11065 11904 - 3.A.1.1.45
TC HRGMv2_1023_43 HRGMv2_1023_43_9 11904 12758 - 3.A.1.1.45
TC HRGMv2_1023_43 HRGMv2_1023_43_10 12846 14162 - 3.A.1.1.45
TF HRGMv2_1023_43 HRGMv2_1023_43_11 14469 15188 - GntR
NULL(UNKNOWN) HRGMv2_1023_43 HRGMv2_1023_43_12 15275 15391 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1023_43 HRGMv2_1023_43_13 15446 17866 + 4.A.1.1.8
Gene ID: HRGMv2_1023_43_5
Type: CAZyme
Location: 5430 - 6935 (+)
Gene ID: HRGMv2_1023_43_6
Type: CAZyme
Location: 7064 - 9331 (+)
Gene ID: HRGMv2_1023_43_7
Type: TC
Location: 9800 - 10996 (-)
Gene ID: HRGMv2_1023_43_8
Type: TC
Location: 11065 - 11904 (-)
Gene ID: HRGMv2_1023_43_9
Type: TC
Location: 11904 - 12758 (-)
Gene ID: HRGMv2_1023_43_10
Type: TC
Location: 12846 - 14162 (-)
Gene ID: HRGMv2_1023_43_11
Type: TF
Location: 14469 - 15188 (-)
Gene ID: HRGMv2_1023_43_12
Type:
Location: 15275 - 15391 (-)
Gene ID: HRGMv2_1023_43_13
Type: TC
Location: 15446 - 17866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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