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Cluster: HRGMv2_1023_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1023_42 HRGMv2_1023_42_2 814 1581 - 1.A.23.4.10
TC HRGMv2_1023_42 HRGMv2_1023_42_3 1919 2713 - 3.A.1.34.1
TC HRGMv2_1023_42 HRGMv2_1023_42_4 2706 3629 - 3.A.1.34.1
TC HRGMv2_1023_42 HRGMv2_1023_42_5 3834 4814 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_1023_42 HRGMv2_1023_42_6 4974 5762 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1023_42 HRGMv2_1023_42_7 6013 7416 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_1023_42 HRGMv2_1023_42_8 7598 8161 - 4.A.1.2.6
peptidase HRGMv2_1023_42 HRGMv2_1023_42_9 8407 9309 + S09.UPW
TC HRGMv2_1023_42 HRGMv2_1023_42_10 9496 11853 + 9.A.8.1.6
pfam HRGMv2_1023_42 HRGMv2_1023_42_11 11949 12431 + tRNA_edit
TC HRGMv2_1023_42 HRGMv2_1023_42_12 12535 13731 + 2.A.1.2.18
CAZyme HRGMv2_1023_42 HRGMv2_1023_42_13 13883 15259 + GH13_20
Gene ID: HRGMv2_1023_42_2
Type: TC
Location: 814 - 1581 (-)
Gene ID: HRGMv2_1023_42_3
Type: TC
Location: 1919 - 2713 (-)
Gene ID: HRGMv2_1023_42_4
Type: TC
Location: 2706 - 3629 (-)
Gene ID: HRGMv2_1023_42_5
Type: TC
Location: 3834 - 4814 (-)
Gene ID: HRGMv2_1023_42_6
Type:
Location: 4974 - 5762 (-)
Gene ID: HRGMv2_1023_42_7
Type: pfam
Location: 6013 - 7416 (-)
Gene ID: HRGMv2_1023_42_8
Type: TC
Location: 7598 - 8161 (-)
Gene ID: HRGMv2_1023_42_9
Type: peptidase
Location: 8407 - 9309 (+)
Gene ID: HRGMv2_1023_42_10
Type: TC
Location: 9496 - 11853 (+)
Gene ID: HRGMv2_1023_42_11
Type: pfam
Location: 11949 - 12431 (+)
Gene ID: HRGMv2_1023_42_12
Type: TC
Location: 12535 - 13731 (+)
Gene ID: HRGMv2_1023_42_13
Type: CAZyme
Location: 13883 - 15259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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